The target of this project is to provide a preview for volume rendering in the browser.
In future it will be integrated in the current workflow of experiments and therefore in the reconstruction process

15 커밋

13 브랜치

0 릴리즈

Sven Werchner 919d62ec0f Realized reconstruction using the tofu framework.		9 년 전
misc	4ccb2f077e Update readme file and add a mongodb dump	9 년 전
reconstruction	919d62ec0f Realized reconstruction using the tofu framework.	9 년 전
static	dab5ce7db8 Cleaned .gitignore file from unneccessary excludes and add lost files	9 년 전
templates	919d62ec0f Realized reconstruction using the tofu framework.	9 년 전
visualization	919d62ec0f Realized reconstruction using the tofu framework.	9 년 전
volumes	919d62ec0f Realized reconstruction using the tofu framework.	9 년 전
webserverhelper	fc9b044017 Initial commit with version 0.0.7	9 년 전
.gitignore	dab5ce7db8 Cleaned .gitignore file from unneccessary excludes and add lost files	9 년 전
Gruntfile.js	fc9b044017 Initial commit with version 0.0.7	9 년 전
README.md	d932028b9c Update readme and remove initial settings_env.py	9 년 전
clouds.jpg	fc9b044017 Initial commit with version 0.0.7	9 년 전
manage.py	fc9b044017 Initial commit with version 0.0.7	9 년 전
package.json	fc9b044017 Initial commit with version 0.0.7	9 년 전
startDev.sh	3a362eef6a Basic reconstruction procedure added	9 년 전

volume-visualization

The target of this project is to provide a preview for volume rendering in the browser. In future it will be integrated in the current workflow of experiments and therefore in the reconstruction process

installation

Please install requirements first.

Example for OpenSuse and with package manager 'zypper':

zypper-packages:

python >= 2.7 python-numpy python-numpy-devel mongodb

pip-packages:

blinker Django six scipy Pillow scikit-image tifffile mongoengine mongodbforms (from git repo: pip intall git+http://git.ipe.kit.edu/schultze/django-mongodbforms.git)

Import the mongodbdatabase

In general, please refer to the mongodb homepage.

Untar the package 'misc/dump/volume_visualization.mongodb.tar.gz' Then run 'mongorestore --db volume_visualization dump/volume_visualization/' Note that, with this dump, it is not possible to use zooming. For zooming, the original datas are needed, and that are far too big to store it in the git repository.

Configure the application properly

Go to 'visualization/' Copy the 'settings_env.py.dev' file to 'settings_env.py'. Review the configuration options and put in yours.

Start running the server

Be sure, that your local mongodb server is running

Just do a 'python manage.py runserver' For more options, please refer to the original Django documentation

Developing JS

Please use Grunt, e.g. 'grunt watch' (in a separate terminal)

README.md